| MirGeneDB ID | Mal-Novel-6 |
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| Family name |
MAL-NOVEL-6 (all species) |
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| Seed |
AAGUCUC |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. albus
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| Node of Origin (family) |
M. albus
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884864.1: 120127-120191 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GACCAGAACAACGUCCAGGUCGAGUGAGGAAUGAUCAAACGAGGGAAAUGGGUUUUAACCACUGGGUACAUCUCAAGUCUCUUGUAUGAUCAUUCCUUGCUCUUUGACCGCAAAGAGUUCUGGUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GACCAGAACAACGUCCAGGUC--| UG A AA UUUUAACCA
GAG AGGAAUGAUCA ACGAGGGA UGGG \
CUC UCCUUACUAGU UGUUCUCU ACUC C
UUGGUCUUGAGAAACGCCAGUUU^ GU A GA UACAUGGGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Mal-Novel-6_5p* |
| mirBase accession | None |
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| Sequence |
0- AUGAUCAAACGAGGGAAAUGGG -22
Get sequence
|
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| Mature sequence |
Mal-Novel-6_3p |
| mirBase accession | None |
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| Sequence |
43- CAAGUCUCUUGUAUGAUCAUUC -65
Get sequence
|
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