| MirGeneDB ID | Mdo-Mir-12325 |
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| Family name |
MIR-12325 (all species) |
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| Seed |
AAGCAUU |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-12325
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. domestica
|
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| Node of Origin (family) |
M. domestica
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Genome context
(monDom5_add) |
2: 266544099-266544153 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAUUAUUUUGACACACUGCCUUGUACGUAGUGGGUACUUAUUCAAUGUUUGUUAGUUAGUCAAUAAGCAUUAUUAAGUAUCUACUGUGUGCCAGGUCAAAUUGCCACCAUUCAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAUUAUUUUGACACACU--| U UUC AGU
GCCU GUACGUAGUGGGUACUUA AAUGUUUGUU U
UGGA CGUGUGUCAUCUAUGAAU UUACGAAUAA A
UUACUUACCACCGUUAAAC^ C UA- CUG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Star sequence |
Mdo-Mir-12325_5p* |
| mirBase accession | MIMAT0050172 |
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| Sequence |
0- UGGGUACUUAUUCAAUGUUUGUU -23
Get sequence
|
|---|
| Mature sequence |
Mdo-Mir-12325_3p |
| mirBase accession | MIMAT0050173 |
|---|
| Sequence |
33- UAAGCAUUAUUAAGUAUCUACU -55
Get sequence
|
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