| MirGeneDB ID | Mdo-Mir-7298 |
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| Family name |
MIR-7298 (all species) |
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| Seed |
CAAGUUA |
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| Species |
Gray short-tailed opossum (Monodelphis domestica) |
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| MiRBase ID |
mdo-mir-7298
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. domestica
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| Node of Origin (family) |
M. domestica
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Genome context
(monDom5_add) |
3: 17940149-17940205 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGAACUUAAAAAAUGAUCUUACUGUUUUUUCAAGUUAAGCUUCAAGCCAGUGUUUACACUCACCUGGCUUGAAGCUUAACAUGGGAAAAAAAUCAAGAUCACGGCAACUGUUCCCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GUGAACUUAAAAAAUGA- ACUG-| UU A UGUUUA
UCUU UUUU CA GUUAAGCUUCAAGCCAG \
AGAA AAAA GU CAAUUCGAAGUUCGGUC C
ACCCUUGUCAACGGCACU CUAAA^ GG A CACUCA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Mdo-Mir-7298_5p |
| mirBase accession | MIMAT0028584 |
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| Sequence |
0- UCAAGUUAAGCUUCAAGCCAGU -22
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7298-5p
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| Star sequence |
Mdo-Mir-7298_3p* |
| mirBase accession | MIMAT0028585 |
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| Sequence |
35- UGGCUUGAAGCUUAACAUGGGA -57
Get sequence
|
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| Proposed targets |
TargetScanVert: mdo-miR-7298-3p
|
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