MirGeneDB 2.1

MirGeneDB ID

Mdo-Mir-7313

Family name MIR-7313 (all species)
Seed CUGAACA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-7313
Paralogues
Orthologues
Node of Origin (locus) M. domestica
Node of Origin (family) M. domestica
Genome context
(monDom5_add)
4: 80422358-80422415 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCACGGCUAAUAUACUUGGGCAGGCAGGGGAAAUCCGUAUACCUUUCAGCUGAGAACAUAAGAACAACUGAACAGGUUUCCGGAUUCCCUGACCUGAUCUGGGAACAGCCACUUCUUG
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Structure
        10         20          30        40         50        
GCACGGCUAAUAUACUU-   -    -|      AA    UAU    -     C  AGAAC 
                  GGG CAGG CAGGGGA  UCCG   ACCU UUCAG UG     A
                  UCU GUCC GUCCCUU  AGGC   UGGA AAGUC AC     U
GUUCUUCACCGACAAGGG   A    A^      --    CUU    C     A  AAGAA 
      110       100        90          80        70        60
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Mdo-Mir-7313_5p*

mirBase accessionMIMAT0028626
Sequence
0- AAAUCCGUAUACCUUUCAGCUG -22
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Proposed targets TargetScanVert: mdo-miR-7313-5p
Mature sequence

Mdo-Mir-7313_3p

mirBase accessionMIMAT0028627
Sequence
36- ACUGAACAGGUUUCCGGAUUCC -58
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Proposed targets TargetScanVert: mdo-miR-7313-3p