MirGeneDB 3.0

MirGeneDB ID

Mml-Novel-1

Family name MML-NOVEL-1 (all species)
Seed CACAGCC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) M. mulatta
Node of Origin (family) M. mulatta
Genome context
(GCA_003339765.3_Mmul_10_traces)
CM014350.1: 108279013-108279073 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCCACCUGCUCUGAGUGCAGGGCUCGGGCUGCCCAGGCUGGGGCUGCUGCUGUAUCUGAGCUGUGGAGUCACAGCCCCGGCCUGGCCUGGCCUGGCCUUUCCACCUGCCAGCUGCAGAGC
Get precursor sequence
Structure
        10          20        30         40        50          
GGCCACCUGCUCUGAGUGC--|    U      GC-              CU   GUAUCUG 
                     AGGGC CGGGCU   CCAGGCUGGGGCUG  GCU       \
                     UUCCG GUCCGG   GGUCCGGCCCCGAC  UGA       A
CGAGACGUCGACCGUCCACCU^    -      UCC              AC   GGUGUCG 
 .       110       100         90        80        70
Deep sequencing
3' NTU No
MotifsUG at 5p(-14)
Star sequence

Mml-Novel-1_5p*

mirBase accessionNone
Sequence
0- UGCCCAGGCUGGGGCUGCUGCU -22
Get sequence
Mature sequence

Mml-Novel-1_3p

mirBase accessionNone
Sequence
39- UCACAGCCCCGGCCUGGCCUGG -61
Get sequence