| MirGeneDB ID | Mml-Novel-1 |
|---|
| Family name |
CAT-NOVEL-1 (all species) |
|---|
| Seed |
UAGAUGA |
|---|
| Species |
Rhesus monkey (Macaca mulatta) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Hsa-Novel-1-v1
Hsa-Novel-1-v2
|
|---|
| Node of Origin (locus) |
Catarrhini
|
|---|
| Node of Origin (family) |
Catarrhini
|
|---|
Genome context
(rheMac8_trace) |
1_tracefrom_Mmul_10: 104-162 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CAGAGCAGCUGCAGGGACAAAGUCCCCAGCUCAGCUGCAGCACCCAUGGGUCCACUUUGAGGCAAGGAUAGAUGAGGGCUUGGCUGUGAAAUGAAACCAGGGGAGAGACGGAAGCUGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGAGCAGCUGCAGGGACAAAGUCCC GCU--| C A - GG ACUUU
CA CAGCUG AGC CC CAU GUCC G
GU GUCGGU UCG GG GUA UAGG A
ACGUCGAAGGCAGAGAGGGGACCAAA AAAGU^ - - A GA AACGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
| |
|
|
|---|
| Star sequence |
Mml-Novel-1_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- UCAGCUGCAGCACCCAUGGGUCC -23
Get sequence
|
|---|
| Mature sequence |
Mml-Novel-1_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- AUAGAUGAGGGCUUGGCUGUGA -59
Get sequence
|
|---|
