| MirGeneDB ID | Mml-Novel-16 |
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| Family name |
MML-NOVEL-16 (all species) |
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| Seed |
GUCAAUU |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. mulatta
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| Node of Origin (family) |
M. mulatta
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Genome context
(rheMac8_trace) |
chr19: 48875276-48875336 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCCUGAGGGGAAAAAAUUAUUAUUUAGGUUGGUGCAAAAGUAAUUGGGGUUUUUGCCAUUACCUUUAACGUCAAUUACGUUUGCACUGACCUAAUAUAUUACAUGUCUUCAAGUCAACUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AUCCUGAGGGGAAAAAAUUAUUAU--| UG A G UUUGCCA
UUAGGU GUGCAAA GUAAUUGG GUU \
AAUCCA CACGUUU CAUUAACU CAA U
CUCAACUGAACUUCUGUACAUUAUAU^ GU G G UUUCCAU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| Comment | There is a second Drosha cut +1 on both arms. |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Star sequence |
Mml-Novel-16_5p* |
| mirBase accession | None |
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| Sequence |
0- UGGUGCAAAAGUAAUUGGGGUU -22
Get sequence
|
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| Mature sequence |
Mml-Novel-16_3p |
| mirBase accession | None |
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| Sequence |
39- CGUCAAUUACGUUUGCACUGAC -61
Get sequence
|
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