MirGeneDB 3.0

MirGeneDB ID

Mmr-Novel-4

Family name MMR-NOVEL-4 (all species)
Seed CAGGAAA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) M. murinus
Node of Origin (family) M. murinus
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007677.1: 26080373-26080428 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCUGUUCUAGAUGUUGGACUCUACGGAUCCAGGAAAGCAAGGAUCUUGACUGACUUGUUUGUCAAGAUCCUUGCUGUCCUGAACCCGGUGAGUCUGUGUUCCAGUGGGGGGAGA
Get precursor sequence
Structure
        10          20        30        40        50       
GUGCUGUUCUAGAUGUU--|     UA   AUC     A               UGAC 
                   GGACUC  CGG   CAGGA AGCAAGGAUCUUGAC    U
                   UCUGAG  GCC   GUCCU UCGUUCCUAGAACUG    U
AGAGGGGGGUGACCUUGUG^     UG   CAA     G               UUUG 
    110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Novel-4_5p

mirBase accessionNone
Sequence
0- CCAGGAAAGCAAGGAUCUUGAC -22
Get sequence
Star sequence

Mmr-Novel-4_3p*

mirBase accessionNone
Sequence
34- CAAGAUCCUUGCUGUCCUGAAC -56
Get sequence