| MirGeneDB ID | Mmr-Novel-5 |
|---|
| Family name |
MMR-NOVEL-5 (all species) |
|---|
| Seed |
AGGGAAC |
|---|
| Species |
Gray mouse lemur (Microcebus murinus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
M. murinus
|
|---|
| Node of Origin (family) |
M. murinus
|
|---|
Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007673.1: 17835021-17835084 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAUUUGACAGUGAGGCUGCCCCAGAAAAUCUAGGGAACUGGAAUGUGAAGGCCUGGACCACUUUAAUAUGGGUCAUAUAUUCCAGUUCUCUUGCAUUUCUCAUGCCUAAUUCUUCCCCCUUUUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AAUUUGACAGUGAGGCU--| CCC AUCU AA UGGACCAC
GC AGAAA AGGGAACUGGAAUGUG GGCC \
CG UCUUU UCUCUUGACCUUAUAU CUGG U
GUUUUCCCCCUUCUUAAUC^ UAC ACGU A- GUAUAAUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Mmr-Novel-5_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAGGGAACUGGAAUGUGAAGGCC -23
Get sequence
|
|---|
| Star sequence |
Mmr-Novel-5_3p* |
| mirBase accession | None |
|---|
| Sequence |
42- UCAUAUAUUCCAGUUCUCUUGC -64
Get sequence
|
|---|
