| MirGeneDB ID | Mmr-Novel-6 |
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| Family name |
MMR-NOVEL-6 (all species) |
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| Seed |
GUCUCCU |
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| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. murinus
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| Node of Origin (family) |
M. murinus
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007682.1: 6625657-6625717 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUACCAUCGCCUGCUUCUCCCAGCCCCCAUAGUCUCCUCCUAAAACUUCUCUGAGUGCAGUCUGGUCUCAGGGAGUGCAGGAGGGGGUGACGGGGGUUGGGGCUCAUCUGCACAGGCCUGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GUACCAUCGCCUGCUUC--| AUA AAA U GUGCAG
UCCCAGCCCCC GUCUCCUCCU ACUUC CUGA \
GGGGUUGGGGG UGGGGGAGGA UGAGG GACU U
GGUCCGGACACGUCUACUC^ CAG CG- - CUGGUC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
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| Mature sequence |
Mmr-Novel-6_5p |
| mirBase accession | None |
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| Sequence |
0- AGUCUCCUCCUAAAACUUCUCUGA -24
Get sequence
|
|---|
| Star sequence |
Mmr-Novel-6_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- AGGGAGUGCAGGAGGGGGUGAC -61
Get sequence
|
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