MirGeneDB 3.0

MirGeneDB ID

Mmu-Mir-3068

Family name MIR-3068 (all species)
Seed UGGAGUU
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-3068
Paralogues
Orthologues Rno-Mir-3068 
Node of Origin (locus) Muridae
Node of Origin (family) Muridae
Genome context
(mm10)
chr12: 87437685-87437747 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGCAAGGGGGACAGAGUAUGCGAGAGUAAUUGGAGUUCAUGCAAGUUCUAACCAGCUUACUCAGUAGCUGGGUGAAUUGCAGUACUCCAACAUUCUGCUUCCAUCUGCUCAGUUCUCAUGCU
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Structure
        10        20            30        40        50        60  
AAGCAAGGGGGACAGAGUAU----| G     AA       UCA     G   UAA  AGCUUAC 
                        GC AGAGU  UUGGAGU   UGCAA UUC   CC       U
                        CG UCUUA  AACCUCA   ACGUU AAG   GG       C
UCGUACUCUUGACUCGUCUACCUU^ -     C-       UG-     -   UG-  UCGAUGA 
 120       110       100          90         80          70
Deep sequencing
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CommentThere are Dicer cuts on the 3p arm -1 and -2 relative to what is annoated here.
3' NTU No
MotifsNo
Tissue expression
 +
Br Br Ce Ce Em Em He Ki Li Lu Ov Pa Sk Sp Te
Mature sequence

Mmu-Mir-3068_5p

mirBase accessionMIMAT0014842
Sequence
0- UUGGAGUUCAUGCAAGUUCUAACC -24
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Proposed targets TargetScanVert: mmu-miR-3068-5p
miRDB: MIMAT0014842
Star sequence

Mmu-Mir-3068_3p*

mirBase accessionMIMAT0014843
Sequence
41- GGUGAAUUGCAGUACUCCAACA -63
Get sequence
Proposed targets TargetScanVert: mmu-miR-3068-3p
miRDB: MIMAT0014843