MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-7647

Family name MIR-7647 (all species)
Seed AGUCCAG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-7647
Paralogues
Orthologues
Node of Origin (locus) M. musculus
Node of Origin (family) M. musculus
Genome context
(mm10)		 chr5: 123522636-123522695 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAACACCAUUCAUAUAAAUUAAAAGUAUGAACUACCACCUCCUGGCCUUUUUUUUAAAAAGCACCAAAAGUCCAGGAGGUGGUAGUACACACUUUUAAUUCCAGCACUUGGGAGGCAGA
Get precursor sequence
Structure
        10          20        30        40        50         
AAAACACCAUUCAUAUA--|         A  A               C     UUUUAA 
                   AAUUAAAAGU UG ACUACCACCUCCUGG CUUUU      A
                   UUAAUUUUCA AC UGAUGGUGGAGGACC GAAAA      A
AGACGGAGGGUUCACGACC^         C  A               U     CCACGA 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Ad Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt Wt
Star sequence

Mmu-Mir-7647_5p*
mirBase accessionMIMAT0029796
Sequence 
0- AACUACCACCUCCUGGCCUUUU -22
Get sequence
Proposed targets TargetScanVert: mmu-miR-7647-5p
miRDB: MIMAT0029796
Mature sequence

Mmu-Mir-7647_3p
mirBase accessionMIMAT0029797
Sequence 
38- AAGUCCAGGAGGUGGUAGUACA -60
Get sequence
Proposed targets TargetScanVert: mmu-miR-7647-3p
miRDB: MIMAT0029797