| MirGeneDB ID | Mom-Novel-1 |
|---|
| Family name |
MOM-NOVEL-1 (all species) |
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| Seed |
CCUGCAA |
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| Species |
Mossy chiton (Mopalia muscosa) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. mucosa
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| Node of Origin (family) |
M. mucosa
|
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Genome context
(GCA_031763545.1_ASM3176354v1_genomic_Mom) |
JARFOD010032919.1: 4409-4476 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCAGUACCAAAAGGAGGAAACUACCCGACUCCUGCAAGUUUCUGGUGGACUUUCACCUUUUCAGACAGAUUCGAGCCUGGCGGUAACUUGUGGGAGUGGGGUGGUUUCUGUAACAUCAGUUUCAGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUCAGUACCAAAAGGAG--| G UG U G A UUCACCUUUU
GAAACUACCC ACUCC CAAGUU CUG UGG CU C
CUUUGGUGGG UGAGG GUUCAA GGC GUC GA A
ACGACUUUGACUACAAUGU^ G GU U G C GCUUAGACAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Mom-Novel-1_5p |
| mirBase accession | None |
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| Sequence |
0- UCCUGCAAGUUUCUGGUGGACU -22
Get sequence
|
|---|
| Star sequence |
Mom-Novel-1_3p* |
| mirBase accession | None |
|---|
| Sequence |
46- CCUGGCGGUAACUUGUGGGAGU -68
Get sequence
|
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