| MirGeneDB ID | Mun-Novel-1 |
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| Family name |
MUN-NOVEL-1 (all species) |
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| Seed |
UAGGGCA |
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| Species |
Microcaecilia (Microcaecilia unicolor) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. unicolor
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| Node of Origin (family) |
M. unicolor
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Genome context
(Mun_miRNA_loci) |
Novel-1_LR594632.1:190281459-190281719: 101-161 [+]
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Precursor
(pre-Mir +30nt flank) |
CUGGCUCCGUUUCUCAUUGCCCCUACCCUUCCUGUGCUGGGUUGCUCUGUAUAAUACUAUUGUGAGCUUUUAGGGCAUCCAAGCAUUGAAAGGGUGGAGAGCUGAUUCUUCUGUGAAAGAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CUGGCUCCGUUUCUCAUU- CC-| CCU G U UAUAAUACUA
GC CUACCCUU GUGCU GG UGCUCUG \
CG GGUGGGAA UACGA CC ACGGGAU U
GAGAAAGUGUCUUCUUAGU AGA^ AGU A U UUUCGAGUGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Mun-Novel-1_5p* |
| mirBase accession | None |
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| Sequence |
0- CCUGUGCUGGGUUGCUCUGUAU -22
Get sequence
|
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| Mature sequence |
Mun-Novel-1_3p |
| mirBase accession | None |
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| Sequence |
39- UUAGGGCAUCCAAGCAUUGAAA -61
Get sequence
|
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