| MirGeneDB ID | Neu-Mir-1540 |
|---|---|
| Family name | MIR-1540 (all species) |
| Seed | CAUGCGC |
| Species | Tammar Wallaby (Notamacropus eugenii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Mdo-Mir-1540 Sha-Mir-1540 |
| Node of Origin (locus) | Marsupialia |
| Node of Origin (family) | Marsupialia |
| Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 616076958-616077016 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUAGGUCAGGAAACUGAAUGUGGUGGGGGUGAUUCCAUGGAGCAUAUGCUCUGGCUCUCUGGGGAUGGACAUGCGCUCUAUGGAAUCACCCCCGCUACAUAAGUAUCUUUAUAGUAAAGGet precursor sequence |
| Structure | 10 20 30 40 50 CUAGGUCAGGAAACUGA--| A CU UGGCUCU AUGUGGUGGGGGUGAUUCCAUGGAGC UAUG C \ UACAUCGCCCCCACUAAGGUAUCUCG GUAC G C GAAAUGAUAUUUCUAUGAA^ C AG UAGGGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Neu-Mir-1540_5p* |
| mirBase accession | None |
| Sequence |
0- GAUUCCAUGGAGCAUAUGCUC -21
Get sequence
|
| Mature sequence | Neu-Mir-1540_3p |
| mirBase accession | None |
| Sequence |
38- ACAUGCGCUCUAUGGAAUCAC -59
Get sequence
|
