MirGeneDB ID | Neu-Novel-13-P1b |
---|---|
Family name | NEU-NOVEL-13 (all species) |
Seed | UUCAUUC |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Novel-13-P1a |
Orthologues | |
Node of Origin (locus) | N. eugenii |
Node of Origin (family) | N. eugenii |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 94976480-94976539 [+] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | GGCUGUAUUUUGAGCUGCUAAGGUCCCACUAUUCAUUCUGAUGACACACUGUUCUGUGACUGUUGAAACAGUGUAUCUCAGAGUGGGAGUGGUCCCUUAGAAUCCUCAUAAUCCUCUUCCGet precursor sequence |
Structure | 10 20 30 40 50 GGCUGUAUUUUGAGCUG---| UC A U C CUGUGA CUAAGG CCACU UUCAUUCUGA GA ACACUGUU \ GAUUCC GGUGA GGGUGAGACU CU UGUGACAA C CCUUCUCCUAAUACUCCUAA^ CU - - A AGUUGU . 110 100 90 80 70 |
Deep sequencing | |
3' NTU | |
Motifs | No |
Mature sequence | Neu-Novel-13-P1b_5p |
mirBase accession | None |
Sequence |
0- AUUCAUUCUGAUGACACACUGUU -23
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|
Star sequence | Neu-Novel-13-P1b_3p* |
mirBase accession | None |
Sequence |
38- CAGUGUAUCUCAGAGUGGGAGU -60
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|