| MirGeneDB ID | Neu-Novel-2 |
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| Family name |
NEU-NOVEL-2 (all species) |
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| Seed |
AUGCGUU |
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| Species |
Tammar Wallaby (Notamacropus eugenii) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
N. eugenii
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| Node of Origin (family) |
N. eugenii
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Genome context
(GCA_028372415.1_mMacEug1.pri) |
CM051820.1: 94966100-94966159 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGGCUGCAAUUUGAGCUGCUGAGGUAUCACUAUGCGUUCUGAAGACACAUUGUUGUGUGACUGUUUAAACCAUGUGUCUCAGAUCGCAGUGAUCCCUUAGAACACUCAUCAUUUCCUUCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GGGCUGCAAUUUGAGCUG--| U AU U A U GUGUGA
CUGAGG AUCACU GCG UCUGA GACACAU GUU \
GAUUCC UAGUGA CGC AGACU CUGUGUA CAA C
CCUUCCUUUACUACUCACAA^ C -- U - C AUUUGU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Br |
Ce |
Fi |
Li |
Mi |
Mi |
Mi |
Mi |
Mi |
Ov |
Se |
Se |
Te |
Te |
Te |
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| Mature sequence |
Neu-Novel-2_5p |
| mirBase accession | None |
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| Sequence |
0- UAUGCGUUCUGAAGACACAUUGUU -24
Get sequence
|
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| Star sequence |
Neu-Novel-2_3p* |
| mirBase accession | None |
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| Sequence |
39- CCAUGUGUCUCAGAUCGCAGU -60
Get sequence
|
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