MirGeneDB ID | Neu-Novel-4 |
---|---|
Family name | NEU-NOVEL-4 (all species) |
Seed | UGACAAU |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | |
Node of Origin (locus) | N. eugenii |
Node of Origin (family) | N. eugenii |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051813.1: 281234698-281234758 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | AAGGAACCUUUGAUGCCAUAAGCCUGAAUCCUGACAAUGCAUCUGAGAAGAGGAGGCAGUAUGUGAAAUCUCUCUCCAGGGCAUUGCAAGAUAAAGGCUUUUUUCUCAUCACUUCUUGUAAGet precursor sequence |
Structure | 10 20 30 40 50 60 AAGGAACCUUUGAUGCCAU--| GA C A A A A - GGCAGU AAGCCU AUC UG CAAUGC UCUG GA GAG GA A UUCGGA UAG AC GUUACG GGAC CU CUC CU U AAUGUUCUUCACUACUCUUUU^ AA A - - - - U AAAGUG . 110 100 90 80 70 |
Deep sequencing | |
3' NTU | No |
Motifs | CNNC at 3p(+17) |
Mature sequence | Neu-Novel-4_5p |
mirBase accession | None |
Sequence |
0- CUGACAAUGCAUCUGAGAAGAGGA -24
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|
Co-mature sequence | Neu-Novel-4_3p |
mirBase accession | None |
Sequence |
40- UCUCUCCAGGGCAUUGCAAGA -61
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|