MirGeneDB 3.0

MirGeneDB ID

Neu-Novel-4

Family name NEU-NOVEL-4 (all species)
Seed UGACAAU
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) N. eugenii
Node of Origin (family) N. eugenii
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051813.1: 281234698-281234758 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGGAACCUUUGAUGCCAUAAGCCUGAAUCCUGACAAUGCAUCUGAGAAGAGGAGGCAGUAUGUGAAAUCUCUCUCCAGGGCAUUGCAAGAUAAAGGCUUUUUUCUCAUCACUUCUUGUAA
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Structure
        10          20        30        40        50         60 
AAGGAACCUUUGAUGCCAU--|     GA   C  A      A    A  A   -  GGCAGU 
                     AAGCCU  AUC UG CAAUGC UCUG GA GAG GA      A
                     UUCGGA  UAG AC GUUACG GGAC CU CUC CU      U
AAUGUUCUUCACUACUCUUUU^     AA   A  -      -    -  -   U  AAAGUG 
 .       110       100        90          80          70
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Mature sequence

Neu-Novel-4_5p

mirBase accessionNone
Sequence
0- CUGACAAUGCAUCUGAGAAGAGGA -24
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Co-mature sequence

Neu-Novel-4_3p

mirBase accessionNone
Sequence
40- UCUCUCCAGGGCAUUGCAAGA -61
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