MirGeneDB 3.0

MirGeneDB ID

Neu-Novel-8

Family name NEU-NOVEL-8 (all species)
Seed UCAGUCU
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) N. eugenii
Node of Origin (family) N. eugenii
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051815.1: 300853085-300853141 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAACCUGGCCUCCUGGCUCACCGGCCAGUCCUCAGUCUAUGCCAGCACCAGUCUGUUUGCUGCUGGUACUGGCAUAGACUGUUUGGUUGUCUGGUCUGACAAGGCUCCUGUGGAGAG
Get precursor sequence
Structure
        10           20        30         40        50       
CAACCUGGCCUCCUGGCUC---     C  GU CU-|            C      CUGU 
                      ACCGG CA  C   CAGUCUAUGCCAG ACCAGU    \
                      UGGUC GU  G   GUCAGAUACGGUC UGGUCG    U
GAGAGGUGUCCUCGGAACAGUC     U  UG UUU^            A      UCGU 
     110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Mature sequence

Neu-Novel-8_5p

mirBase accessionNone
Sequence
0- CUCAGUCUAUGCCAGCACCAGU -22
Get sequence
Co-mature sequence

Neu-Novel-8_3p

mirBase accessionNone
Sequence
33- UGGUACUGGCAUAGACUGUUUGGU -57
Get sequence