MirGeneDB 3.0

MirGeneDB ID

Nve-Mir-2027

Family name MIR-2027 (all species)
Seed UGCGAUU
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-2027
Paralogues
Orthologues
Node of Origin (locus) N. vectensis
Node of Origin (family) N. vectensis
Genome context
(GCF_000209225.1_ASM20922v1_NVE)
NW_001834173.1: 295192-295244 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGAUCUUUCAAUCCGAGAGCCUUAAGGCUUGCUUGUUGGUAAUUUUGCAUCUGUUGCACAUGCGAUUUUACCAAAAUGCAAUUCUUAUGGUUCAGUGAUCAGGAACCCAAUA
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Structure
        10          20        30        40        50      
CAGAUCUUUCAAUCCGA--|    U    GC    UUG       UU      C GU 
                   GAGCC UAAG  UUGC   UUGGUAA  UUGCAU U  \
                   CUUGG AUUC  AACG   AACCAUU  AGCGUA A  U
AUAACCCAAGGACUAGUGA^    U    UU    UAA       UU      C CG 
 110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Nve-Mir-2027_5p*

mirBase accessionMIMAT0009772
Sequence
0- UGCUUGUUGGUAAUUUUGCAUCU -23
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Mature sequence

Nve-Mir-2027_3p

mirBase accessionMIMAT0009773
Sequence
30- AUGCGAUUUUACCAAAAUGCAAU -53
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