MirGeneDB ID | Nve-Mir-2037 |
Family name |
MIR-2037 (all species) |
Seed |
GUGAUUG |
Species |
Starlet sea anemone (Nematostella vectensis) |
MiRBase ID |
nve-mir-2037
|
Paralogues |
|
Orthologues |
Asp-Mir-2037
|
Node of Origin (locus) |
Anenthemonae
|
Node of Origin (family) |
Anenthemonae
|
Genome context (GCF_000209225.1_ASM20922v1_NVE) |
NW_001833981.1: 29639-29691 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAUGAGAUGGAGCUAGGUCUUGGUCACCGUGGUAAAAGCCGUCCAAGCACCCUCUUGGCAGUGUGAUUGGAGACUUUUACCGUGGUCUGAGAUCAGUCAUACCCGGCGAACUG
Get precursor sequence
|
Structure | 10 20 30 40 50
CAUGAGAUGGAGCUAGG----| UG UC CCG -- CCUC
UCU G ACCGUGGUAAAAG UCCAA GCAC U
AGA C UGGUGCCAUUUUC AGGUU UGUG U
GUCAAGCGGCCCAUACUGACU^ GU -- AG- AG ACGG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Nve-Mir-2037_5p* |
mirBase accession | MIMAT0009796 |
Sequence |
0- GGUAAAAGCCGUCCAAGCACC -21
Get sequence
|
Mature sequence |
Nve-Mir-2037_3p |
mirBase accession | MIMAT0009797 |
Sequence |
31- UGUGAUUGGAGACUUUUACCGU -53
Get sequence
|