| MirGeneDB ID | Nve-Mir-2045 |
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| Family name |
MIR-2045 (all species) |
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| Seed |
CCCAGAG |
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| Species |
Starlet sea anemone (Nematostella vectensis) |
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| MiRBase ID |
nve-mir-2045
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
N. vectensis
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| Node of Origin (family) |
N. vectensis
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Genome context
(GCF_000209225.1_ASM20922v1_NVE) |
NW_001834371.1: 186020-186081 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAAUUUAUGUCUUAUUAAUGACAAUAGUUUUCCCAGAGUGUUGAGUUCAUACAAGAUUUCUUGUGCUUGUAUGGUAAUUAAUCUCUGGUACAUAGAUUCCAUAAAAUACAUUGACUGAAAUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AAAUUUAUGUCUUAUUAAUGACAAUAGUUUUC--| U GU- GAUUU
CCAGAG GUUGA UCAUACAA C
GGUCUC UAAUU GGUAUGUU U
UUAAAGUCAGUUACAUAAAAUACCUUAGAUACAU^ - AAU CGUGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Nve-Mir-2045_5p |
| mirBase accession | MIMAT0009814 |
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| Sequence |
0- UCCCAGAGUGUUGAGUUCAUACAA -24
Get sequence
|
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| Star sequence |
Nve-Mir-2045_3p* |
| mirBase accession | MIMAT0009815 |
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| Sequence |
38- GUAUGGUAAUUAAUCUCUGGUACA -62
Get sequence
|
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