MirGeneDB 3.0

MirGeneDB ID

Nve-Mir-9421

Family name MIR-9421 (all species)
Seed UGCGUAU
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID nve-mir-9421
Paralogues
Orthologues
Node of Origin (locus) N. vectensis
Node of Origin (family) N. vectensis
Genome context
(GCF_000209225.1_ASM20922v1_NVE)
NW_001834334.1: 892620-892673 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUCGUCAGUUAAACGACUUGUAUUGGUUACCAUAAAUGGUAGAUACGAAAUUCGUUAAAUGAUUGCGUAUCUGCCAUUAAUGCUAACCAACACAGGUUCCAACAAAUGGUAACC
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Structure
        10          20        30        40        50      
GUCGUCAGUUAAACGAC--|   A       C   A             A    CGU 
                   UUGU UUGGUUA CAU AAUGGUAGAUACG AAUU   U
                   GACA AACCAAU GUA UUACCGUCUAUGC UUAG   A
CCAAUGGUAAACAACCUUG^   C       C   A             G    UAA 
  110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
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Star sequence

Nve-Mir-9421_5p*

mirBase accessionNone
Sequence
0- CAUAAAUGGUAGAUACGAAAUU -22
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Mature sequence

Nve-Mir-9421_3p

mirBase accessionMIMAT0035377
Sequence
32- UUGCGUAUCUGCCAUUAAUGCU -54
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