MirGeneDB ID | Nve-Mir-9422 |
Family name |
MIR-9422 (all species) |
Seed |
GACAGAA |
Species |
Starlet sea anemone (Nematostella vectensis) |
MiRBase ID |
nve-mir-9422
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
N. vectensis
|
Node of Origin (family) |
N. vectensis
|
Genome context (GCF_000209225.1_ASM20922v1_NVE) |
NW_001834392.1: 211467-211516 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUACUGCGUAAUAGAACCAGACCGCAUGUCAGCGUUUCAAGUUUCCGUCAGUCAUGGCUGACAGAAGAUAGAAGCGCUGACAUGUGGUCUGAUGUCACAUGAUGAGCAUG
Get precursor sequence
|
Structure | 10 20 30 40 50
UUACUGCGUAAUAGAAC--| AAG C C
CAGACCGCAUGUCAGCGUUUC UUUC GUCAGU A
GUCUGGUGUACAGUCGCGAAG GAAG CAGUCG U
GUACGAGUAGUACACUGUA^ AUA A G
. 100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Nve-Mir-9422_5p* |
mirBase accession | None |
Sequence |
0- AGCGUUUCAAGUUUCCGUCAGU -22
Get sequence
|
Mature sequence |
Nve-Mir-9422_3p |
mirBase accession | MIMAT0035378 |
Sequence |
28- UGACAGAAGAUAGAAGCGCUGA -50
Get sequence
|