MirGeneDB ID | Nve-Mir-9442-P2 |
Family name |
MIR-9442 (all species) |
Seed |
AUAUCAG |
Species |
Starlet sea anemone (Nematostella vectensis) |
MiRBase ID |
|
Paralogues |
Nve-Mir-9442-P1
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Orthologues |
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Node of Origin (locus) |
N. vectensis
|
Node of Origin (family) |
N. vectensis
|
Genome context (GCF_000209225.1_ASM20922v1_NVE) |
NW_001827556.1: 3485-3533 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
UCUGCUGAUAGAAUAGGCGGGGUGCCCCGGAAUAUCAGGAGGACGCAUUCGUUUUACGCAUGCGUCCUCGUGAUACUUCCGGUCAUUCCCAAAUGCCACCUCGCAUUUA
Get precursor sequence
|
Structure | 10 20 30 40 50
UCUGCUGAUAGAAUAGGC- UGCC -| G U UU
GGGG CCGGAA UAUCA GAGGACGCAU CG \
CCCU GGCCUU AUAGU CUCCUGCGUA GC U
AUUUACGCUCCACCGUAAA UACU C^ G C AU
100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Nve-Mir-9442-P2_5p |
mirBase accession | None |
Sequence |
0- AAUAUCAGGAGGACGCAUUCG -21
Get sequence
|
Star sequence |
Nve-Mir-9442-P2_3p* |
mirBase accession | None |
Sequence |
28- CAUGCGUCCUCGUGAUACUUC -49
Get sequence
|