MirGeneDB 3.0

MirGeneDB ID

Nve-Mir-9442-P2

Family name MIR-9442 (all species)
Seed AUAUCAG
Species Starlet sea anemone (Nematostella vectensis)
MiRBase ID
Paralogues Nve-Mir-9442-P1 
Orthologues
Node of Origin (locus) N. vectensis
Node of Origin (family) N. vectensis
Genome context
(GCF_000209225.1_ASM20922v1_NVE)
NW_001827556.1: 3485-3533 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGCUGAUAGAAUAGGCGGGGUGCCCCGGAAUAUCAGGAGGACGCAUUCGUUUUACGCAUGCGUCCUCGUGAUACUUCCGGUCAUUCCCAAAUGCCACCUCGCAUUUA
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Structure
        10         20        30         40        50    
UCUGCUGAUAGAAUAGGC-    UGCC      -|    G          U  UU 
                   GGGG    CCGGAA UAUCA GAGGACGCAU CG  \
                   CCCU    GGCCUU AUAGU CUCCUGCGUA GC  U
AUUUACGCUCCACCGUAAA    UACU      C^    G          C  AU 
       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Bl Ju La Pr
Mature sequence

Nve-Mir-9442-P2_5p

mirBase accessionNone
Sequence
0- AAUAUCAGGAGGACGCAUUCG -21
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Star sequence

Nve-Mir-9442-P2_3p*

mirBase accessionNone
Sequence
28- CAUGCGUCCUCGUGAUACUUC -49
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