MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-1327

Family name MIR-1327 (all species)
Seed AAAAGGC
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-1327
Paralogues
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041728.1: 25806166-25806229 [-]
Precursor
(pre-Mir +30nt flank)
UUAACAAGGACUGUACUGGGGACUGUUCUUUAAAAGGCUGUUAAAUGAUGAUCCUAUAUUUUUUAACGUCAACAUCAUUUAGAAACCUUUUAGAGAACGGUCUUCCUCACCCACUACCACCGGC
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Structure
        10          20        30        40        50        60 
UUAACAAGGACUGUACU--|                   CUG          AUCCUAUAUU 
                   GGGGACUGUUCUUUAAAAGG   UUAAAUGAUG          U
                   CUUCUGGCAAGAGAUUUUCC   GAUUUACUAC          U
CGGCCACCAUCACCCACUC^                   AAA          AACUGCAAUU 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-1327_5p

mirBase accessionMIMAT0006796
Sequence
0- UAAAAGGCUGUUAAAUGAUGAU -22
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Star sequence

Oan-Mir-1327_3p*

mirBase accessionMIMAT0026750
Sequence
42- CAUCAUUUAGAAACCUUUUAGA -64
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