MirGeneDB 2.1

MirGeneDB ID

Oan-Mir-1363

Family name MIR-1363 (all species)
Seed AGGGCCC
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-1363
Paralogues
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041744.1: 1154803-1154863 [+]
Precursor
(pre-Mir +30nt flank)
GAGACAGAGCCGGGUAUGGGCAGAGGGACCGAGGGCCCCGGAACUCGAGCCGCAGCGAGAUCCGACCCGGUCGAGCCCCUGGGGCUGUCCGUCCUGCUGUCCGGGUCCUCGUUCUGGAUGA
Get precursor sequence
Structure
        10          20        30        40         50          
GAGACAGAGCCGGGUAU--      A     C  G        AA-|    G   CAGCGAG 
                   GGGCAG GGGAC GA GGCCCCGG   CUCGA CCG       \
                   CCUGUC UCCUG CU UCGGGGUC   GAGCU GGC       A
AGUAGGUCUUGCUCCUGGG      G     C  G        CCC^    -   CCAGCCU 
 .       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Mature sequence

Oan-Mir-1363_5p

mirBase accessionMIMAT0007025
Sequence
0- GAGGGCCCCGGAACUCGAGCCG -22
Get sequence
Star sequence

Oan-Mir-1363_3p*

mirBase accessionMIMAT0007026
Sequence
39- GUCGAGCCCCUGGGGCUGUCCG -61
Get sequence