| MirGeneDB ID | Oan-Mir-1365 |
|---|
| Family name |
MIR-1365 (all species) |
|---|
| Seed |
ACUGGGC |
|---|
| Species |
Platypus (Ornithorhynchus anatinus) |
|---|
| MiRBase ID |
oan-mir-1365
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
O. anatinus
|
|---|
| Node of Origin (family) |
O. anatinus
|
|---|
Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041730.1: 140252531-140252590 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
ACUAGAAGACAGCUGGAGUGCAUGGCACUGUACUGGGCACCACCUGUAUGCAGAGCAUUAUACUAGAUGCCUACUGGAGUGCCUAGCACUGUACUGAGCACCAUCAACUUCUGUGAGAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACUAGAAGACAGCUGGA--| A C U A CA U U GAGCAUU
GUGC UGG AC GU CUGGGCAC CC GUA GCA \
CACG GUC UG CA GAUCCGUG GG CAU CGU A
GGAGAGUGUCUUCAACUAC^ A A U C A- U C AGAUCAU
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Oan-Mir-1365_5p |
| mirBase accession | MIMAT0007028 |
|---|
| Sequence |
0- UACUGGGCACCACCUGUAUGCA -22
Get sequence
|
|---|
| Star sequence |
Oan-Mir-1365_3p* |
| mirBase accession | MIMAT0007029 |
|---|
| Sequence |
39- CCUACUGGAGUGCCUAGCACU -60
Get sequence
|
|---|
