| MirGeneDB ID | Oan-Mir-1381 |
|---|
| Family name |
MIR-1381 (all species) |
|---|
| Seed |
CCCUCGC |
|---|
| Species |
Platypus (Ornithorhynchus anatinus) |
|---|
| MiRBase ID |
oan-mir-1381
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
O. anatinus
|
|---|
| Node of Origin (family) |
O. anatinus
|
|---|
Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041741.1: 18817132-18817194 [+]
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCGGGCACGCACCAUUUCCAGUGGGUUGCCUCCCUCGCCCCCUCUCCGGAGCCGUCCCCUCUGACUCACCGGUACGGGAGGUUGCGAGGUUCGCAGCUCGGGCUGGAAUAAGAAAGAUUUCUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCGGGCACGCACCAUUUC --| CUC CC U GA CGUCCCCUC
CAGU GGGUUGC CCUCGC CCUC CCG GC \
GUCG CUCGACG GGAGCG GGAG GGC UG U
UUCUUUAGAAAGAAUAAG GG^ CUU UU - A- GCCACUCAG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Oan-Mir-1381_5p |
| mirBase accession | MIMAT0007120 |
|---|
| Sequence |
0- UCCCUCGCCCCCUCUCCGGAGC -22
Get sequence
|
|---|
| Star sequence |
Oan-Mir-1381_3p* |
| mirBase accession | MIMAT0007121 |
|---|
| Sequence |
41- GUACGGGAGGUUGCGAGGUUCG -63
Get sequence
|
|---|
