MirGeneDB 2.1

MirGeneDB ID

Oan-Novel-1

Family name OAN-NOVEL-1 (all species)
Seed ACUAAUA
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) O. anatinus
Node of Origin (family) O. anatinus
Genome context
(mOrnAna1.p.v1_plustraces)
KAAE-cps63c07: 674-739 [+]
Precursor
(pre-Mir +30nt flank)
CAGAGUGCAUGCACACAGCAGGUGCUUAACGAACACCUCAAUUAUUAGUAGUAAAGUAAUUAUUAUUAGCACACUACUAAUAAUUGUGGUAUCGGUUAAGUGCCUGCUAAUACUACAAUAAUCUCA
Get precursor sequence
Structure
        10          20         30        40        50        60  
CAGAGUGCAUGCACACA--     UG     -|  AC   U              AAAGUAAUU 
                   GCAGG  CUUAA CGA  ACC CAAUUAUUAGUAGU         A
                   CGUCC  GAAUU GCU  UGG GUUAAUAAUCAUCA         U
ACUCUAAUAACAUCAUAAU     GU     G^  A-   U              CACGAUUAU 
    120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Novel-1_5p*

mirBase accessionNone
Sequence
0- GAACACCUCAAUUAUUAGUAGU -22
Get sequence
Mature sequence

Oan-Novel-1_3p

mirBase accessionNone
Sequence
44- UACUAAUAAUUGUGGUAUCGGU -66
Get sequence