| MirGeneDB ID | Oan-Novel-5 |
|---|
| Family name |
OAN-NOVEL-5 (all species) |
|---|
| Seed |
GGAGCCG |
|---|
| Species |
Platypus (Ornithorhynchus anatinus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
O. anatinus
|
|---|
| Node of Origin (family) |
O. anatinus
|
|---|
Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041728.1: 133875511-133875570 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
CGCCGCGACCGGACCGUGGCGGACGGGCGACGGAGCCGGGAUUGGAACCUUGGGAGUCGGAGGGACCUGGGUUCCGAUCCCGGCUCGGCCACCCGUCUGCUGUGUUGACCUUGGGGAGAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGCCGCGACCGGACCGU--| CGACG U GAGUC
GGCGGACGGG GAGCCGGGAUUGGAACCU GG G
UCGUCUGCCC CUCGGCCCUAGCCUUGGG CC G
UAGAGGGGUUCCAGUUGUG^ ACCGG U AGGGA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | UG at 5p(-14) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Oan-Novel-5_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CGGAGCCGGGAUUGGAACCUUGG -23
Get sequence
|
|---|
| Star sequence |
Oan-Novel-5_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- UGGGUUCCGAUCCCGGCUCGGCC -60
Get sequence
|
|---|
