| MirGeneDB ID | Obi-Mir-12508 |
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| Family name |
MIR-12508 (all species) |
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| Seed |
GGUUUUG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Npo-Mir-12508
Ovu-Mir-12508
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| Node of Origin (locus) |
Cephalopoda
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| Node of Origin (family) |
Cephalopoda
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Genome context
(PRJNA270931_OBI) |
KQ419141: 196735-196794 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCGAUAAUGUGAGCUUUGCCCCAGUGGAGCUGGUUUUGUGAGAUGUUCAUUGGUUACAUAAAAUAUUCAGUGACCAUCUCUAAAACUAACUUUCCUGGUGGUCAUAACAACUUCAUACAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UCGAUAAUGUGAGCUUU- -| UG C U U UUACAU
GCC CCAG GAG UGGUUUUG GAGAUG UCAUUGG \
UGG GGUC UUC AUCAAAAU CUCUAC AGUGACU A
CACAUACUUCAACAAUAC U^ CU A - C UAUAAA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Obi-Mir-12508_5p |
| mirBase accession | None |
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| Sequence |
0- UGGUUUUGUGAGAUGUUCAUUGG -23
Get sequence
|
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| Star sequence |
Obi-Mir-12508_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AGUGACCAUCUCUAAAACUAAC -60
Get sequence
|
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