| MirGeneDB ID | Obi-Mir-12513-v2 |
|---|
| Family name |
MIR-12513 (all species) |
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| Seed |
CCGAUUG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Mir-12513-v1
|
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| Orthologues |
Esc-Mir-12513
Ovu-Mir-12513-v2
|
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| Node of Origin (locus) |
Coleoidea
|
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ416971: 45159-45212 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAGAUGAACGCAUCUCACGGGUCAACACGUUCCGAUUGUUCUAAGUCCGGCUCUUAGUUAAAAGCCGGACUUGAAAAAUCGGAGUGUGUGAGCCGAUUCAGACACGAGACUAAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAGAUGAACGCAUCUCA--| G A G U CUUA
CGG UCA CACGUUCCGAUU UUC AAGUCCGGCU G
GCC AGU GUGUGAGGCUAA AAG UUCAGGCCGA U
CAAUCAGAGCACAGACUUA^ G - A - AAAU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12513-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCCGAUUGUUCUAAGUCCGGCUC -23
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12513-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
33- GCCGGACUUGAAAAAUCGGAG -54
Get sequence
|
|---|
