| MirGeneDB ID | Obi-Mir-12516 |
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| Family name |
MIR-12516 (all species) |
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| Seed |
GUCUGUG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Esc-Mir-12516
Ovu-Mir-12516
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(PRJNA270931_OBI) |
KQ421349: 141718-141776 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CACCGUUUUUAUUCUGUUGGCUUUGUGAGAUGUCUGUGGGAUAAAGGUUAGUCUUAAUGUUGCAAACUAACAUUUAAACCAAUGACAUUACACAAUGCUAAAGAACGUCGAAUAUGUUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
CACCGUUUUUAUUCUGU--| U A UG GA G CUUAAU
UGGC UUGUG GAUGUC UGG UAAA GUUAGU \
AUCG AACAC UUACAG ACC AUUU CAAUCA G
CUUGUAUAAGCUGCAAGAA^ U A UA AA A AACGUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Obi-Mir-12516_5p |
| mirBase accession | None |
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| Sequence |
0- UGUCUGUGGGAUAAAGGUUAGU -22
Get sequence
|
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| Star sequence |
Obi-Mir-12516_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
37- UAACAUUUAAACCAAUGACAUU -59
Get sequence
|
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