| MirGeneDB ID | Obi-Mir-12524 |
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| Family name |
MIR-12524 (all species) |
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| Seed |
CAUCCAC |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Esc-Mir-12524
Ovu-Mir-12524
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(PRJNA270931_OBI) |
KQ422919: 914604-914672 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GAUACUUUGGAGUUUUUGUGUGUGGUGCACACAUCCACAUGUUGUUGACUUGCCAAUUUCCCCUUCUCACAGUACCGAGUCAACAACUUGUGGAUGUGUACAAAACAGACUCAUUGCAACAUAUGAAGU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GAUACUUUGGAGUUUUU--| G GG C U CCAAUUUCCCC
GU UGU UG ACACAUCCACA GUUGUUGACUUG \
CA ACA AC UGUGUAGGUGU CAACAACUGAGC U
UGAAGUAUACAACGUUACU^ G AA A U CAUGACACUCU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Obi-Mir-12524_5p |
| mirBase accession | None |
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| Sequence |
0- ACAUCCACAUGUUGUUGACUUG -22
Get sequence
|
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| Star sequence |
Obi-Mir-12524_3p* |
| mirBase accession | None |
|---|
| Sequence |
47- AGUCAACAACUUGUGGAUGUGU -69
Get sequence
|
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