MirGeneDB ID | Obi-Mir-12529 |
Family name |
MIR-12529 (all species) |
Seed |
CGAUGGA |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
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Orthologues |
Esc-Mir-12529
Ovu-Mir-12529
|
Node of Origin (locus) |
Coleoidea
|
Node of Origin (family) |
Coleoidea
|
Genome context (PRJNA270931_OBI) |
KQ423864: 301314-301376 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
GCCAAGACACAUACGAGUAUAUCAUCUGAACCGAUGGAUCUGUUACGUGACACGAUGGUAUGUACUGACAUUGUUGACGUAACACCAUUGCGCAGAGAUAUAUGAUUGCACGCGAGGGGAGUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCCAAGACACAUACGAG----| A AAC AUC - CGAUGGUAU
UAUAUC UCUG CGAUGG UGUUACGU GACA \
AUAUAG AGAC GUUACC ACAAUGCA UUGU G
GUGAGGGGAGCGCACGUUAGU^ - GC- --- G UACAGUCAU
120 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Obi-Mir-12529_5p |
mirBase accession | None |
Sequence |
0- CCGAUGGAUCUGUUACGUGACACG -24
Get sequence
|
Co-mature sequence |
Obi-Mir-12529_3p |
mirBase accession | None |
Sequence |
40- UUGUUGACGUAACACCAUUGCGC -63
Get sequence
|