| MirGeneDB ID | Obi-Mir-12546 |
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| Family name |
MIR-12546 (all species) |
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| Seed |
ACCCCAG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Esc-Mir-12546
Ovu-Mir-12546
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
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Genome context
(PRJNA270931_OBI) |
KQ421376: 999365-999427 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGGCUACUUUUAAUAGUUGCCAUUUGUUAAAACCCCAGAGACUGGUGGCUUGGUUACAUUUAACAAAUGCCAAGCAAUGGCUUCUUAGGUUUUAACAGUACUUUACAACUGCAGAACUGAAAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CGGCUACUUUUAAUAGUUGCCAU--| CC GA GUG UUACAUU
UUGUUAAAACC AGA CUG GCUUGG U
GACAAUUUUGG UCU GGU CGAACC A
GAAAGUCAAGACGUCAACAUUUCAU^ AU UC AA- GUAAACA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Mature sequence |
Obi-Mir-12546_5p |
| mirBase accession | None |
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| Sequence |
0- AACCCCAGAGACUGGUGGCUUGG -23
Get sequence
|
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| Co-mature sequence |
Obi-Mir-12546_3p |
| mirBase accession | None |
|---|
| Sequence |
41- AAGCAAUGGCUUCUUAGGUUUU -63
Get sequence
|
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