| MirGeneDB ID | Obi-Mir-12559-P1 |
|---|
| Family name |
MIR-12559 (all species) |
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| Seed |
GCUGGAA |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Mir-12559-P2
|
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| Orthologues |
Ovu-Mir-12559-P1
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
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Genome context
(PRJNA270931_OBI) |
KQ415882: 267322-267380 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAAUAUCUAAAUAUGAGGUGUCCACUGAAUGCUGGAAGACGGGUAAUGGGUGUACAAUACUGGAGCACCCAAUCAGUCGUCCAACAUCCAGAGGAUUCUGCGCUACUCCGAAUGAGAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GCAAUAUCUAAAUAUGA--| U A A C A G AA ACAAU
GG GUCC CUG AUG UGGA GAC GGU UGGGUGU \
UC UAGG GAC UAC ACCU CUG CUA ACCCACG A
AAGAGUAAGCCUCAUCGCG^ U A C A G A -- AGGUC
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12559-P1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGCUGGAAGACGGGUAAUGGGUGU -24
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12559-P1_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACCCAAUCAGUCGUCCAACAUC -59
Get sequence
|
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