| MirGeneDB ID | Obi-Mir-12563 |
|---|
| Family name |
MIR-12563 (all species) |
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| Seed |
CAAUUUC |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12563
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ419823: 190792-190844 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUCCAUCCACUGAUUUGACAAAAAAGGUCUCACUCCUACUUCAAGGUUGGAUGUUUACUAUUCAAUUUCAAAGCAGGAGUGGUACCUUUUUGUCACCAGCUUCAAGAAUUUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUCCAUCCACUGAUUUG---| A CU A CA GUU
ACAAAAA GGU CACUCCU CUU AGGUUGGAU \
UGUUUUU CCA GUGAGGA GAA UUUAACUUA U
UAUUUAAGAACUUCGACCAC^ - UG C AC UCA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12563_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CACUCCUACUUCAAGGUUGGAU -22
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12563_3p |
| mirBase accession | None |
|---|
| Sequence |
31- UCAAUUUCAAAGCAGGAGUGGU -53
Get sequence
|
|---|
