| MirGeneDB ID | Obi-Mir-12567 |
|---|
| Family name |
MIR-12567 (all species) |
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| Seed |
AAGCAAG |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Ovu-Mir-12567
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ416617: 304180-304240 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UACGCUGUACUUGACUGAUGGACUUGCGGAGGCUUCAUUAUUGCUGCUUUGUGUUUGUUGAACGGCCCAAAGCAAGUUUUGAUGGAGUUGCCGCAACCAUUGCCACAGGAAUCCCAUUGAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UACGCUGUACUUGACUG----| AC AG UU - UGUUUGU
AUGG UUGCGG GCUUCAUUA GCU GCUUUG U
UACC AACGCC UGAGGUAGU UGA CGAAAC G
GAGUUACCCUAAGGACACCGU^ -- GU UU A CCGGCAA
. 110 100 90 80 70 60 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Obi-Mir-12567_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGCUUCAUUAUUGCUGCUUUGU -22
Get sequence
|
|---|
| Mature sequence |
Obi-Mir-12567_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- AAAGCAAGUUUUGAUGGAGUUGC -61
Get sequence
|
|---|
