MirGeneDB ID | Obi-Mir-12568-v2 |
Family name |
MIR-12568 (all species) |
Seed |
UCUGAGU |
Species |
California two-spot octopus (Octopus bimaculoides) |
MiRBase ID |
|
Paralogues |
Obi-Mir-12568-v1
|
Orthologues |
Ovu-Mir-12568-v2
|
Node of Origin (locus) |
Octopus
|
Node of Origin (family) |
Octopus
|
Genome context (PRJNA270931_OBI) |
KQ426666: 108507-108564 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCCAAAGGUAUAGUUUACCGUAAAAAUGUUUCUGAGUUCCUCAGUCAGUGAAAUAUGCCAAUGCACUGAUUGGAGAAGGCAGAAAACAUUAUUAUGGAAUUUUGACGUAAACCAACU
Get precursor sequence
|
Structure | 10 20 30 40 50
UUCCAAAGGUAUAGUUUA-- A -| AG CU AAAUAU
CCGUAA AAUG UUUCUG UUC CAGUCAGUG \
GGUAUU UUAC AAAGAC AAG GUUAGUCAC G
UCAACCAAAUGCAGUUUUAA A A^ GG AG GUAACC
110 100 90 80 70 60 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Obi-Mir-12568-v2_5p |
mirBase accession | None |
Sequence |
0- UUCUGAGUUCCUCAGUCAGUG -21
Get sequence
|
Star sequence |
Obi-Mir-12568-v2_3p* |
mirBase accession | None |
Sequence |
35- ACUGAUUGGAGAAGGCAGAAAAC -58
Get sequence
|