| MirGeneDB ID | Obi-Mir-12583 |
|---|
| Family name |
MIR-12583 (all species) |
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| Seed |
GCACGAC |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Ovu-Mir-12583
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ426038: 6982-7039 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCUUUAUGAAGGCUGCACCAUGGGUUAGUUUGCACGACGCAGUUGUAUCACGGCGUCUCUUCAGCAGCGAUCAAUUGAACCGUGUUAACUGGCCCUAAGACGGCGACUUUGGACGGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUUUAUGAAGGCUGCACCAU--| U ACG U ACG CGUCU
GGGUUAGUU GCACG CAGUUG AUC G \
CCCGGUCAA UGUGC GUUAAC UAG C C
CAGGCAGGUUUCAGCGGCAGAAU^ U CAA - CGA GACUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12583_5p |
| mirBase accession | None |
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| Sequence |
0- UGCACGACGCAGUUGUAUCACGG -23
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12583_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- GCGAUCAAUUGAACCGUGUUAA -58
Get sequence
|
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