| MirGeneDB ID | Obi-Mir-12584-v1 |
|---|
| Family name |
MIR-12584 (all species) |
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| Seed |
CUGAGCA |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Mir-12584-v2
|
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| Orthologues |
Ovu-Mir-12584-v1
|
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| Node of Origin (locus) |
Octopus
|
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| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ415659: 1637501-1637561 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUGGAACGAUGAGUGAAAAGCCUGGAAAAGUCUGAGCAAAGGAAAUGUUAGGCCGUAAAAUAUUCCUGGCAGCAUGUUCUUUUCUCUGAUUAGUCCAGGUUUCAAACAAUCGCGUGGAAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUGGAACGAUGAGUGAA--| AA U C A AG GUAAAA
AAGCCUGGA AGUC GAG AAAGGA AUGUU GCC \
UUUGGACCU UUAG CUC UUUCUU UACGA CGG U
UAAAGGUGCGCUAACAAAC^ GA U U G -- UCCUUA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Obi-Mir-12584-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCUGAGCAAAGGAAAUGUUAGGCC -24
Get sequence
|
|---|
| Star sequence |
Obi-Mir-12584-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- CAGCAUGUUCUUUUCUCUGAUU -61
Get sequence
|
|---|
