| MirGeneDB ID | Obi-Novel-15 |
|---|
| Family name |
COL-NOVEL-15 (all species) |
|---|
| Seed |
CCGCUGU |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Esc-Novel-15
Ovu-Novel-15
|
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| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
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Genome context
(PRJNA270931_OBI) |
KQ419514: 1219280-1219338 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUGGGUUGAUUUUGAUAAUGUCAAGAGCGCAGGUUAACCGGAUUAGCGUUCUGUCCGGUUCAAAAAGACCGCUGUUCCAGUUCAUCUGCGCCCGGACUCAGUUGCCUUCCACCAGAAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUGGGUUGAUUUUGAUAAU---| AAGA U C U U GUCCGG
GUC GCGCAGGU AAC GGA UAGCG UCU \
CAG CGCGUCUA UUG CCU GUCGC AGA U
UUAAGACCACCUUCCGUUGACU^ GCC- C A U C AAAACU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Star sequence |
Obi-Novel-15_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUUAACCGGAUUAGCGUUCU -22
Get sequence
|
|---|
| Mature sequence |
Obi-Novel-15_3p |
| mirBase accession | None |
|---|
| Sequence |
37- ACCGCUGUUCCAGUUCAUCUGC -59
Get sequence
|
|---|
