| MirGeneDB ID | Obi-Novel-62-P2 |
|---|
| Family name |
OCT-NOVEL-62 (all species) |
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| Seed |
GCUGGAA |
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| Species |
California two-spot octopus (Octopus bimaculoides) |
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| MiRBase ID |
|
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| Paralogues |
Obi-Novel-62-P1
|
|---|
| Orthologues |
Ovu-Novel-62-P2
|
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| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
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Genome context
(PRJNA270931_OBI) |
KQ419311: 241025-241083 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUAACGUCUACAUUAAAAGGUUUCACUGGAUGCUGGAAGACGGGUAAUGGGUGUACAAUACUGAAGCACCCAAUCGGUCCUCCCCCAUCCAGAGGAUUCCACAUAACGCCAAGUAUAUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUAACGUCUACAUUAAAA- UU A-| CU A G AA ACAAU
GG UC CUGGAUG GGA GAC GGU UGGGUGU \
CC AG GACCUAC CCU CUG CUA ACCCACG A
AUAUAUGAACCGCAAUACA UU GA^ CC C G -- AAGUC
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-62-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGCUGGAAGACGGGUAAUGGGUGU -24
Get sequence
|
|---|
| Star sequence |
Obi-Novel-62-P2_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- ACCCAAUCGGUCCUCCCCCAUC -59
Get sequence
|
|---|
