| MirGeneDB ID | Obi-Novel-74 |
|---|
| Family name |
OCT-NOVEL-74 (all species) |
|---|
| Seed |
CAUGAUC |
|---|
| Species |
California two-spot octopus (Octopus bimaculoides) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Ovu-Novel-74
|
|---|
| Node of Origin (locus) |
Octopus
|
|---|
| Node of Origin (family) |
Octopus
|
|---|
Genome context
(PRJNA270931_OBI) |
KQ423845: 5296-5353 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAUUGACUUCAAAGAAGAGAAUCUAUUAGCUCAUGAUCAUAGAACAAGAGACAAUAGGGAGAAAGGUCUCUUUUCUGUGAUCAUGAAGUGAUGUAUUUCCUCUGACCUGGUCAGUUAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAUUGACUUCAAAGAAGA--| C GC C AAUAGG
GAAU UAUUA UCAUGAUCAUAGAA AAGAGAC \
UUUA GUAGU AGUACUAGUGUCUU UUCUCUG G
GAUUGACUGGUCCAGUCUCC^ U GA - GAAAGA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Obi-Novel-74_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCAUGAUCAUAGAACAAGAGACA -23
Get sequence
|
|---|
| Star sequence |
Obi-Novel-74_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- UCUCUUUUCUGUGAUCAUGAAG -58
Get sequence
|
|---|
