| MirGeneDB ID | Ocu-Mir-12091 |
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| Family name |
MIR-12091 (all species) |
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| Seed |
GACAGUC |
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| Species |
Rabbit (Oryctolagus cuniculus) |
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| MiRBase ID |
ocu-mir-12091
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. cuniculus
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| Node of Origin (family) |
O. cuniculus
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Genome context
(oryCun2_add) |
chrX: 44424515-44424575 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUUCUGCUGCCAGAUUGGGCUUGGUGGUCUGACAGUCACUGAUGCCUCCACCCUGUGUUAUGUCAGUGAGUGAGACAAGUGACUGUUUGAUUACUAUGCCUGCUGCUCGCCACUCAGAAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AAUUCUGCUGCCAGAUU-- U U GA C ---| CCUGUG
GGGC UGGUGGUC GACAGUCACU UG CUC CAC U
UCCG AUCAUUAG UUGUCAGUGA AC GAG GUG U
GAAGACUCACCGCUCGUCG U U -- A UGA^ ACUGUA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Mature sequence |
Ocu-Mir-12091_5p |
| mirBase accession | MIMAT0048621 |
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| Sequence |
0- UGACAGUCACUGAUGCCUCCACCC -24
Get sequence
|
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| Star sequence |
Ocu-Mir-12091_3p* |
| mirBase accession | MIMAT0048622 |
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| Sequence |
38- GAGUGAGACAAGUGACUGUUUGA -61
Get sequence
|
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