| MirGeneDB ID | Ocu-Mir-12094 |
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| Family name |
MIR-12094 (all species) |
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| Seed |
GACUGUU |
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| Species |
Rabbit (Oryctolagus cuniculus) |
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| MiRBase ID |
ocu-mir-12094
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. cuniculus
|
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| Node of Origin (family) |
O. cuniculus
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Genome context
(oryCun2_add) |
chr4: 80950553-80950610 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAUGAAAGGGAUGAGGUGAGCUCCAGUUCCAGAGCGGAGGUAACAGUACCUCUAGAAAUGAUCCAGAUGACUGUUAGCUCCGAUCAGCACUGAGGCUCCUCUACACUCUACUCCUCUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAUGAAAGGGAUGAGGU---| UC UCCA G G ACC UAGAAA
GAGC CAGU GA CGGAG UAACAGU UC \
CUCG GUCA CU GCCUC AUUGUCA AG U
AUCUCCUCAUCUCACAUCUC^ GA CGA- A G GU- ACCUAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Star sequence |
Ocu-Mir-12094_5p* |
| mirBase accession | MIMAT0048627 |
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| Sequence |
0- AGAGCGGAGGUAACAGUACCUC -22
Get sequence
|
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| Mature sequence |
Ocu-Mir-12094_3p |
| mirBase accession | MIMAT0048628 |
|---|
| Sequence |
37- UGACUGUUAGCUCCGAUCAGC -58
Get sequence
|
|---|
