MirGeneDB 3.0

MirGeneDB ID

Ocu-Mir-12095

Family name MIR-12095 (all species)
Seed GGCCAAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-12095
Paralogues
Orthologues
Node of Origin (locus) O. cuniculus
Node of Origin (family) O. cuniculus
Genome context
(oryCun2_add)
chr14: 161843810-161843867 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAGGCUCCAUGGAAUUAAAUGUUACAGAAGGGCCAAGAACAAUAGAAACUGCAUUGCUUAGUUCCAAUUCCAUUGUUCUUGGCCAUUCUGUAACAUUGCCUAAUAUCUUGCUUUAUG
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Structure
        10          20        30        40        50        
UCAGGCUCCAUGGAAUUA--|           G             A   ACUGCAUUG 
                    AAUGUUACAGAA GGCCAAGAACAAU GAA         C
                    UUACAAUGUCUU CCGGUUCUUGUUA CUU         U
GUAUUUCGUUCUAUAAUCCG^           A             C   AACCUUGAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-12095_5p

mirBase accessionMIMAT0048631
Sequence
0- GGGCCAAGAACAAUAGAAACU -21
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Star sequence

Ocu-Mir-12095_3p*

mirBase accessionMIMAT0048632
Sequence
37- AUUCCAUUGUUCUUGGCCAUU -58
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