MirGeneDB 3.0

MirGeneDB ID

Ofu-Novel-1

Family name OFU-NOVEL-1 (all species)
Seed AUUGAAC
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) O. fusiformis
Node of Origin (family) O. fusiformis
Genome context
(GCA_903813345.2_Owenia)
CAIIXF020000005.1: 17204261-17204318 [-]
Precursor
(pre-Mir +30nt flank)
UGGUUUGGUGACAACUAGAAAGGCCAGGUUUGGUGGGUGGUGGUACAACAGCUUAAAGUAAAGUGCUAUUGAACCACCAGCCAGCAAGUUAAGGGGCUCUUAAAUCAACAAACAACAU
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Structure
        10        20           30        40        50        
UGGUUUGGUGACAACUAGAAA    AGG---|   G   G       A   C   UUAAA 
                     GGCC      UUUG UGG UGGUGGU CAA AGC     G
                     UCGG      GAAC ACC ACCACCA GUU UCG     U
UACAACAAACAACUAAAUUC-    GGAAUU^   G   G       A   A   UGAAA 
      110       100         90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ow Ow
Star sequence

Ofu-Novel-1_5p*

mirBase accessionNone
Sequence
0- UGGUGGGUGGUGGUACAACAGC -22
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Mature sequence

Ofu-Novel-1_3p

mirBase accessionNone
Sequence
36- UAUUGAACCACCAGCCAGCAAG -58
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