| MirGeneDB ID | Ofu-Novel-1 |
|---|
| Family name |
OFU-NOVEL-1 (all species) |
|---|
| Seed |
AUUGAAC |
|---|
| Species |
tubeworm (Owenia fusiformis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
O. fusiformis
|
|---|
| Node of Origin (family) |
O. fusiformis
|
|---|
Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000005.1: 17204261-17204318 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
UGGUUUGGUGACAACUAGAAAGGCCAGGUUUGGUGGGUGGUGGUACAACAGCUUAAAGUAAAGUGCUAUUGAACCACCAGCCAGCAAGUUAAGGGGCUCUUAAAUCAACAAACAACAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGGUUUGGUGACAACUAGAAA AGG---| G G A C UUAAA
GGCC UUUG UGG UGGUGGU CAA AGC G
UCGG GAAC ACC ACCACCA GUU UCG U
UACAACAAACAACUAAAUUC- GGAAUU^ G G A A UGAAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Ofu-Novel-1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UGGUGGGUGGUGGUACAACAGC -22
Get sequence
|
|---|
| Mature sequence |
Ofu-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
36- UAUUGAACCACCAGCCAGCAAG -58
Get sequence
|
|---|
