MirGeneDB 3.0

MirGeneDB ID

Ofu-Novel-2

Family name OFU-NOVEL-2 (all species)
Seed GUGGAGA
Species Tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) O. fusiformis
Node of Origin (family) O. fusiformis
Genome context
(GCA_903813345.2_Owenia)
CAIIXF020000006.1: 22196940-22196999 [+]
Precursor
(pre-Mir +30nt flank)
AUUAACAGAAACGGAACUCUAGCCGGUAUUUGUGGAGAUGUGUGAGGGAACAAUAUAUAUGAAAUCUGUUUCUUUGCACGUCCCCAUUCUUACAGGUAGAUAGAUAACCAAAGCAUAUUU
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Structure
        10           20        30        40        50         
AUUAACAGAAACGGAAC---|   G  G   UUU    A      UG        AUAUAU 
                    UCUA CC GUA   GUGG GAUGUG  AGGGAACA      A
                    AGAU GG CAU   UACC CUGCAC  UUCUUUGU      U
UUUAUACGAAACCAAUAGAU^   -  A   UCU    C      GU        CUAAAG 
.       110       100         90        80        70        60
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
 +
Ow Ow
Mature sequence

Ofu-Novel-2_5p

mirBase accessionNone
Sequence
0- UGUGGAGAUGUGUGAGGGAACA -22
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Co-mature sequence

Ofu-Novel-2_3p

mirBase accessionNone
Sequence
38- UUUCUUUGCACGUCCCCAUUCU -60
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