| MirGeneDB ID | Ofu-Novel-2 |
|---|
| Family name |
OFU-NOVEL-2 (all species) |
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| Seed |
GUGGAGA |
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| Species |
Tubeworm (Owenia fusiformis) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
O. fusiformis
|
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| Node of Origin (family) |
O. fusiformis
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Genome context
(GCA_903813345.2_Owenia) |
CAIIXF020000006.1: 22196940-22196999 [+]
|
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Precursor
(pre-Mir +30nt flank) |
AUUAACAGAAACGGAACUCUAGCCGGUAUUUGUGGAGAUGUGUGAGGGAACAAUAUAUAUGAAAUCUGUUUCUUUGCACGUCCCCAUUCUUACAGGUAGAUAGAUAACCAAAGCAUAUUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUAACAGAAACGGAAC---| G G UUU A UG AUAUAU
UCUA CC GUA GUGG GAUGUG AGGGAACA A
AGAU GG CAU UACC CUGCAC UUCUUUGU U
UUUAUACGAAACCAAUAGAU^ - A UCU C GU CUAAAG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Ofu-Novel-2_5p |
| mirBase accession | None |
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| Sequence |
0- UGUGGAGAUGUGUGAGGGAACA -22
Get sequence
|
|---|
| Co-mature sequence |
Ofu-Novel-2_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UUUCUUUGCACGUCCCCAUUCU -60
Get sequence
|
|---|
