MirGeneDB ID | Ofu-Novel-2 |
Family name |
OFU-NOVEL-2 (all species) |
Seed |
GUGGAGA |
Species |
Tubeworm (Owenia fusiformis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
O. fusiformis
|
Node of Origin (family) |
O. fusiformis
|
Genome context (GCA_903813345.2_Owenia) |
CAIIXF020000006.1: 22196940-22196999 [+]
|
Precursor (pre-Mir +30nt flank) |
AUUAACAGAAACGGAACUCUAGCCGGUAUUUGUGGAGAUGUGUGAGGGAACAAUAUAUAUGAAAUCUGUUUCUUUGCACGUCCCCAUUCUUACAGGUAGAUAGAUAACCAAAGCAUAUUU
Get precursor sequence
|
Structure | 10 20 30 40 50
AUUAACAGAAACGGAAC---| G G UUU A UG AUAUAU
UCUA CC GUA GUGG GAUGUG AGGGAACA A
AGAU GG CAU UACC CUGCAC UUCUUUGU U
UUUAUACGAAACCAAUAGAU^ - A UCU C GU CUAAAG
. 110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Ofu-Novel-2_5p |
mirBase accession | None |
Sequence |
0- UGUGGAGAUGUGUGAGGGAACA -22
Get sequence
|
Co-mature sequence |
Ofu-Novel-2_3p |
mirBase accession | None |
Sequence |
38- UUUCUUUGCACGUCCCCAUUCU -60
Get sequence
|